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youssefassis/README.md

Youssef Assis

Machine learning engineer, PhD. Computer vision for healthcare.

PhD at Inria Nancy and CHRU Nancy on detecting intracranial aneurysms in MR angiography.

I work on 3D detection and segmentation in medical images, on how clinicians review and override model output, and on what it takes to move a model from training to regulatory clearance and production monitoring: V&V, non-inferiority study design, PCCP, QMS, drift.

Work

Other projects

  • classify-justify — a surface-defect classifier explained with 17 attribution methods, and whether those explanations can be trusted.
  • CamemBERTQA — French extractive question answering: CamemBERT fine-tuned on FQuAD.
  • travel-planner — a whole trip (route, itinerary, transport, budget, carbon) generated in the browser, no backend.

Research

  • AI–radiologist collaboration — Journal of Neuroradiology, 2025 · paper
  • Automated aneurysm detection — IJCARS, 2024 · paper
  • Anchor-free 3D pose estimation — MICCAI, 2023 (STAR award) · paper
  • 3D segmentation under class imbalance — MICCAI DALI workshop, 2021 · paper
  • PhD thesis, Université de Lorraine, 2024 · manuscript

Website · Google Scholar · LinkedIn

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  1. slicer-aneurysm-review slicer-aneurysm-review Public

    Review AI-detected aneurysm candidates in 3D Slicer — verdicts, rejection reasons, sign-off and provenance for clinical validation studies.

    Python

  2. slicer-weak-annotation slicer-weak-annotation Public

    Weakly annotate aneurysms in 3D Slicer with two clicks — a sphere from a pair of points, for building detection datasets without segmentation.

    Python

  3. DeepAneDet DeepAneDet Public

    Intracranial aneurysm detection in 3D MRA as object detection (IJCARS 2024)

    Python

  4. DeepAnePose DeepAnePose Public

    Aneurysm pose estimation in 3D MRA with deep learning (MICCAI 2023)

    Python

  5. DeepAneSeg DeepAneSeg Public

    Efficient data strategy for brain aneurysm detection in 3D MRA (MICCAI-DALI 2021)

    Python