popgen

Scalable genetics toolkit

Code to compute the XP-CLR statistic to infer natural selection

Population genetic simulations in R

Population Genetics in Julia

Python toolkit for fast genotype I/O, ancestry analysis, population-genetics statistics, genotype QC, GWAS, and visualization

Genotype Representation Graph Library

An R interface for the ADMIXTOOLS software

The `awk` script to calculate population stats in VCF files: convenient, simple, flexible

GPU accelerated population genetics statistics package

A Framework for Coalescent Simulation in R

Scripts for population genetics analysis

Demographic inference from Ancestral Recombination Graphs (ARGs)

Scripts and code for Kākāpō genomic data

Crash Course on Approximate Bayesian Computation in Population Genetics

This is a package of APIs for performing population genetics simulations and analyses in parallel on the GPU.

Graph-based applications for statistical and population genetics

An R packages for Genomics, quantGen, and popGen studies, especially for crop species.

Create population genetics simulations

GPU/CUDA-13 f-statistics, qpAdm/qpWave, qpGraph topology search, DATES

Fine-scale genetic structure in South Western Cameroon