openminds

The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.

A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.

High-level Python API for the EBRAINS Knowledge Graph

Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms where applicable).

A tool to generate openMINDS metadata from BIDS datasets

A metadata model for capturing in-depth descriptions of electrophysiology experiments.

Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json).

Well defined metadata instances for selected schemas of the openMINDS metadata models.

Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility methods.

A MATLAB toolbox for generating openMINDS-compliant linked metadata.

A metadata model for capturing in-depth descriptions of chemical substances and mixtures.

Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).

A metadata model capturing in-depth descriptions of specimen preparations.

Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).

A metadata model for MRI experiments; an openMINDS extension

A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.

Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are expressed in OWL and available in multiple syntaxes.

A metadata model for scholarly publications in neuroscience, including live papers

A metadata model for simulation, data analysis and visualization provenance in neuroscience

A Java library for openMINDS