interactomics

Protein Graph Library

A python package to process protein cross-linking data.

Results, figures, and code for the manuscript of pyXLMS.

Python program that can identify the residues interacting between chains of a complex protein.

Python program which is able to analyse dssp files in order to estimate the interacting area and interacting residues between monomers of a complex protein

A comprehensive user guide for pyXLMS built with Nextra.

Pydantic version of pyXLMS [merged into main pyXLMS in v2.0.0]

A template repository for python scripts and projects using pyXLMS.

A comprehensive user guide for pyXLMS built with Nextra.

Link to the web application for pyXLMS.

Reproducible R/Quarto workflow for the analysis of the JAG1-ICD RIME-DIA proteomics dataset.

First-trimester single-cell RNA-seq analysis, followed by the hypergraph analysis to assess network topology as a marker of function.