An R 📦 for fast and flexible DNA methylation analysis
-
Updated
Jul 21, 2026 - R
#
bedgraph
Here are 9 public repositories matching this topic...
A Python package for fast operations on 1-dimensional genomic signal tracks
-
Updated
Apr 3, 2020 - Python
Decode coverage.bedGraph files that use the run-length encoding format.
-
Updated
Apr 27, 2023 - Jupyter Notebook
FileIO.jl integration for bedGraph files
-
Updated
May 9, 2024 - Julia
Read and write support for bedGraph file format.
-
Updated
May 5, 2024 - Julia
Computes per-sample coverage from multiple BAM, CRAM, or bedGraph files, ensuring each genomic position is counted only once per sample. Chromosomes are processed in parallel to maximize throughput, producing a single tabix-indexed bedGraph.gz file.
-
Updated
Oct 13, 2025 - Python
A Shiny app for plotting bedgraphs on short sequences.
-
Updated
Feb 19, 2024 - R
Generate mappability tracks as BigWig file from genome fasta with GEM
-
Updated
Oct 24, 2017 - Python
Add this topic to your repo
To associate your repository with the bedgraph topic, visit your repo's landing page and select "manage topics."