Skip to content
@parklab

Park Lab at Harvard Medical School

Pinned Loading

  1. nozzle nozzle Public

    Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

    R 67 19

  2. NGSCheckMate NGSCheckMate Public

    Software program for checking sample matching for NGS data

    Python 143 57

  3. SigMA SigMA Public

    Mutational signature analysis for low statistics SNV data

    R 66 21

Repositories

Showing 10 of 52 repositories
  • parklab.github.io Public
    parklab/parklab.github.io's past year of commit activity
    HTML 0 2 0 0 Updated Sep 16, 2026
  • MuSiCal Public

    A comprehensive toolkit for mutational signature analysis

    parklab/MuSiCal's past year of commit activity
    Python 42 7 12 0 Updated Sep 14, 2026
  • shao_zhao_2026_nature_perinatal_cnv Public
    parklab/shao_zhao_2026_nature_perinatal_cnv's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 6, 2026
  • SMaHT_SNV_COLO829BLT50_HAPMAP Public
    parklab/SMaHT_SNV_COLO829BLT50_HAPMAP's past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Aug 30, 2026
  • NanoSeq_parkLab Public Forked from cancerit/NanoSeq

    Analysis software for Nanorate Sequencing (NanoSeq) experiments -- forked over from Sanger Institute

    parklab/NanoSeq_parkLab's past year of commit activity
    C++ 0 AGPL-3.0 15 0 0 Updated Aug 16, 2026
  • denovo_retroelements_kids_first Public
    parklab/denovo_retroelements_kids_first's past year of commit activity
    Python 0 0 0 0 Updated Jul 19, 2026
  • Sonata Public

    Python toolkit for mutational signature analysis using NMF algorithms.

    parklab/Sonata's past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 2, 2026
  • EchoSV Public

    A novel tool for accurately merging haplotype-based SV calls and comparing SVs across reference genomes

    parklab/EchoSV's past year of commit activity
    Python 6 MIT 0 0 0 Updated May 19, 2026
  • zhou_luquette_2026_genomic_damage_in_neurodegeneration Public

    Scripts to recreate analyses in Zhou, Luquette et al. Cell 2026.

    parklab/zhou_luquette_2026_genomic_damage_in_neurodegeneration's past year of commit activity
    Shell 0 0 0 0 Updated May 14, 2026
  • reference_genomes_decoy_analysis Public

    Scripts to analyze read alignment and variant calling from simulated and empirical data based on different human reference genome versions.

    parklab/reference_genomes_decoy_analysis's past year of commit activity
    Shell 0 0 0 0 Updated May 4, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…