Issues

• integration of bedqc

  enhancement
  databio/bedboss#128 · Filter by author khoroshevskyi opened on Jul 2, 2025

• Add Source name to metadata from GEO

  low-prioritywontfix
  databio/bedboss#127 · Filter by author khoroshevskyi opened on Jul 2, 2025
  1

• Parallelizing Bedboss Reprocessing (Heavy Processing)

  low-priority
  databio/bedboss#120 · Filter by author khoroshevskyi opened on May 2, 2025

• Figure out interpolation for BEDstat values output

  databio/bedboss#113 · Filter by author sanghoonio opened on Apr 8, 2025
  

• Speed up calculation of the 'Open Chromatin' plot.

  enhancement
  databio/bedboss#109 · Filter by author khoroshevskyi opened on Mar 5, 2025
  

• For beds with columns that do not adhere to the formal specification, can we generate a schema for them?

  bedClassifierquestion
  databio/bedboss#94 · Filter by author donaldcampbelljr opened on Jan 28, 2025

• Create an ontology of genomic region file formats in JSON format

  bedClassifier
  databio/bedboss#92 · Filter by author donaldcampbelljr opened on Jan 28, 2025
  1

• Should we standardize bed files?

  brainstormingquestion
  databio/bedboss#62 · Filter by author khoroshevskyi opened on Apr 11, 2024
  2

• bedset - create new statistics and metadata

  brainstorming
  databio/bedboss#55 · Filter by author khoroshevskyi opened on Mar 21, 2024

• Bedqc: improving bedqc filter

  brainstorming
  databio/bedboss#48 · Filter by author xuebingjie1990 opened on Jan 27, 2023
  2