Skip to content
@cbg-ethz

Computational Biology Group (CBG)

Beerenwinkel Lab at ETH Zurich

Pinned Loading

  1. V-pipe V-pipe Public

    V-pipe is a pipeline designed for analysing NGS data of short viral genomes

    Jupyter Notebook 148 46

Repositories

Showing 10 of 120 repositories
  • WisePulse Public

    WISE Loculus with V-Pipe – Infra for start-to-end viral wastewater analysis.

    cbg-ethz/WisePulse's past year of commit activity
    Rust 5 MIT 0 35 4 Updated Sep 8, 2026
  • MTBP_Numerics Public
    cbg-ethz/MTBP_Numerics's past year of commit activity
    C++ 0 MIT 0 0 0 Updated Sep 7, 2026
  • scReliability_paper Public
    cbg-ethz/scReliability_paper's past year of commit activity
    Python 4 MIT 0 0 0 Updated Sep 7, 2026
  • SCICoNE Public

    Single-cell copy number calling and event history reconstruction.

    cbg-ethz/SCICoNE's past year of commit activity
    C++ 29 GPL-3.0 11 9 (1 issue needs help) 0 Updated Sep 3, 2026
  • v-pipe-scout Public

    Rapid Viral Variant Exploration and Detection - Interactive WebApp

    cbg-ethz/v-pipe-scout's past year of commit activity
    Python 0 MIT 1 7 7 Updated Aug 27, 2026
  • scDEF Public

    Deep exponential families for single-cell data.

    cbg-ethz/scDEF's past year of commit activity
    Python 21 1 0 2 Updated Aug 17, 2026
  • pangolin Public

    BSSE COVID-19 sequencing of test swab samples

    cbg-ethz/pangolin's past year of commit activity
    Shell 7 3 0 1 Updated Aug 12, 2026
  • mixmax Public
    cbg-ethz/mixmax's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Aug 11, 2026
  • smallgenomeutilities Public

    smallgenomeutilities is a collection of Python scripts to convert alignments between different reference genomes.

    cbg-ethz/smallgenomeutilities's past year of commit activity
    Python 10 GPL-2.0 7 3 6 Updated Aug 10, 2026
  • SC-Bulk-Domain-Adaptation Public
    cbg-ethz/SC-Bulk-Domain-Adaptation's past year of commit activity
    Python 2 MIT 0 0 0 Updated Aug 8, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…