Issues

• Windows: test-review-E-bids.R:48 compares unnormalised paths (backslash vs slash)

  bbuchsbaum/fmrireg#254 · Filter by author bbuchsbaum opened on Oct 16, 2026

• pkgcheck workflow fails on rOpenSci standards items (pre-existing)

  bbuchsbaum/fmrireg#253 · Filter by author bbuchsbaum opened on Oct 16, 2026

• test-coverage: '.onLoad touches no private namespace' fails under covr (instrumentation adds covr:::count)

  bbuchsbaum/fmrireg#252 · Filter by author bbuchsbaum opened on Oct 16, 2026

• [portfolio] Repair pkgdown deployment

  agent:cursorgate:pkgdownportfolio:repair
  bbuchsbaum/fmrireg#245 · Filter by author bbuchsbaum-r-package-portfolio opened on Sep 29, 2026

• noise_spec(voxelwise=TRUE) silently ignored under joint estimation; shared AR uses undocumented row-mean residual pooling

  bbuchsbaum/fmrireg#216 · Filter by author bbuchsbaum opened on Aug 22, 2026

• mask issue: _compute_statistical_volumes

  bbuchsbaum/fmrireg#210 · Filter by author bbuchsbaum opened on Aug 19, 2026

• RFE: public covariance support for joint multi-contrast GLH/F tests

  bbuchsbaum/fmrireg#203 · Filter by author bbuchsbaum opened on Aug 5, 2026
  1

• First-level run-manifest helper: validate events/confounds against dataset run lengths

  bbuchsbaum/fmrireg#199 · Filter by author bbuchsbaum opened on Jun 17, 2026

• glm_qa(manifest): one per-subject QA report (runs kept/dropped, vols, trims, collinearity, efficiency)

  bbuchsbaum/fmrireg#197 · Filter by author bbuchsbaum opened on Jun 16, 2026

• Add a 'ragged dataset' vignette (legacy delimiter, short run, eventless run, out-of-frame trials, confounds!=BOLD)

  bbuchsbaum/fmrireg#198 · Filter by author bbuchsbaum opened on Jun 16, 2026

• Surface trimmed trials/runs in the fit object (fit$exclusions) for QA + second-level

  bbuchsbaum/fmrireg#196 · Filter by author bbuchsbaum opened on Jun 16, 2026
  1

• Interaction-term contrasts silently dropped in prepare_fmri_lm_contrasts (term-key ':' vs '_' mismatch; see fmridesign#9)

  bbuchsbaum/fmrireg#192 · Filter by author bbuchsbaum opened on Jun 12, 2026

• lowrank_control()/latent_sketch: roxygen omits key behavior (m & iters defaults, parcels needs ar_options$by_cluster, parcels=NULL mode, invocation, accuracy guidance)

  bbuchsbaum/fmrireg#191 · Filter by author bbuchsbaum opened on Jun 5, 2026
  1

• rrr_gls engine: subscript out of bounds when per-run nuisance pruning yields unequal column counts (.meta_betas_impl assumes uniform run width)

  bbuchsbaum/fmrireg#190 · Filter by author bbuchsbaum opened on Jun 5, 2026

• soft_subspace_options (rrr_gls engine): functional options undocumented (incl. se_mode='bootstrap'); naming sprawl (soft_subspace/rrr_gls/latent_sketch/lowrank); no examples

  bbuchsbaum/fmrireg#189 · Filter by author bbuchsbaum opened on Jun 5, 2026

• fmri_lm() warns on rank-deficient design but emits NaN coefficient maps; expose aliased columns programmatically

  enhancement
  bbuchsbaum/fmrireg#188 · Filter by author bbuchsbaum opened on Jun 3, 2026

• RFE: write_results() should export per-regressor statistic maps (beta/se/tstat/p) as NIfTIs

  bbuchsbaum/fmrireg#187 · Filter by author bbuchsbaum opened on Jun 3, 2026
  1

• fmri_lm(strategy = "chunkwise") appears to process chunks sequentially and does not use the future plan

  bbuchsbaum/fmrireg#185 · Filter by author bbuchsbaum opened on May 12, 2026

• fmri_lm(chunkwise, progress = TRUE) fails with cli_progress_update() in packed multicore run

  bbuchsbaum/fmrireg#184 · Filter by author bbuchsbaum opened on May 12, 2026

• fmri_lm fails deep in chol2inv() for rank-deficient designs instead of diagnosing aliased columns

  bbuchsbaum/fmrireg#183 · Filter by author bbuchsbaum opened on May 12, 2026

• Enable or document parallel execution for fmri_lm(strategy = "chunkwise")

  bbuchsbaum/fmrireg#182 · Filter by author bbuchsbaum opened on May 5, 2026

• Make write_results() robust to file-backed datasets whose masks lack space metadata

  bbuchsbaum/fmrireg#181 · Filter by author bbuchsbaum opened on May 5, 2026

• pkgcheck results - master

  bbuchsbaum/fmrireg#179 · Filter by author github-actions opened on Aug 28, 2025
  48

• contrast with continuous regressor cross with factor

  bbuchsbaum/fmrireg#4 · Filter by author bbuchsbaum opened on Mar 18, 2020

• event_model fails when variable supplied as character instead of factor

  bbuchsbaum/fmrireg#3 · Filter by author bbuchsbaum opened on Jan 14, 2020