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1. ChoCallate ChoCallate Public

   Nextflow pipeline for consensus-based variant calling

   Nextflow 3

2. MDSearch MDSearch Public

   Tool for identifying the minimum discriminatory set of SNPs

   Python 3

3. MaMaMIA MaMaMIA Public

   R package for introgression detection using coverage depth in GBS sequencing data

   R 3 2

4. gcrank gcrank Public

   C++ library and CLI for O(1) GC-content queries

   C++