Issues

• installation issue

  Xinglab/CLAM#34 · Filter by author haibol2016 opened on Sep 11, 2025

• CLAM peakcaller error

  Xinglab/CLAM#33 · Filter by author LanyuLH opened on Jun 18, 2025

• Optimization: Replace np.apply_along_axis(np.sum, 1, ...) with .sum(axis=1) for faster row-wise summation

  Xinglab/CLAM#32 · Filter by author SaFE-APIOpt opened on Apr 18, 2025

• 建议更新 requirements.txt 以移除过时的 multiprocessing 依赖

  Xinglab/CLAM#31 · Filter by author 524994432 opened on Apr 9, 2025

• Software still supported?

  Xinglab/CLAM#30 · Filter by author LucasMcNU opened on Feb 26, 2025

• Empty annotate file with "inconsistent naming convention for record"

  Xinglab/CLAM#29 · Filter by author maximus-sci opened on Jul 11, 2023

• Question about permutation_callpeak

  Xinglab/CLAM#28 · Filter by author MarLee39 opened on Dec 7, 2022

• Can CLAM be used for isoform-level data

  Xinglab/CLAM#27 · Filter by author niradsp opened on Aug 19, 2021

• syntaxerror while running permutation_peakcaller

  Xinglab/CLAM#22 · Filter by author parhampey opened on Apr 3, 2021
  2

• Library normalization error. Also, peaks at non-genic sequences.

  Xinglab/CLAM#21 · Filter by author juanb001 opened on Mar 28, 2021
  2