Issues

• Allow CI browser acceptance tests through Cloudflare verification

  ModelSEED/ModelSEED-UI#268 · Filter by author jplfaria opened on Sep 29, 2026

• Model download (SBML, cpdtbl) and reconstruction service unavailable after website update

  ModelSEED/ModelSEED-UI#221 · Filter by author luckyniuniu2023-beep opened on Jun 16, 2026

• My models have been queued for two months.

  ModelSEED/ModelSEED-UI#169 · Filter by author rsuag opened on Feb 9, 2026

• Plant models are not valid SBML due to duplicated IDs

  ModelSEED/ModelSEED-UI#162 · Filter by author cdiener opened on Mar 1, 2023
  1

• model seed API

  ModelSEED/ModelSEED-UI#161 · Filter by author wupeng1998 opened on Sep 11, 2022

• README needs update

  ModelSEED/ModelSEED-UI#159 · Filter by author chrstf opened on May 24, 2022

• wrong reaction information in model seed, like rxn15543

  ModelSEED/ModelSEED-UI#130 · Filter by author hongzhonglu opened on Aug 31, 2019

• Concatenating and Minifying using Grunt

  ModelSEED/ModelSEED-UI#109 · Filter by author samseaver opened on Apr 30, 2019

• incorrect metabolite alias

  ModelSEED/ModelSEED-UI#85 · Filter by author aalsiyabi opened on May 30, 2018

• update genome links to new patric website

  ModelSEED/ModelSEED-UI#63 · Filter by author nconrad opened on Dec 19, 2016
  2

• Several biomass compounds

  ModelSEED/ModelSEED-UI#57 · Filter by author smoretti opened on Oct 7, 2016

• Cellular compartments list?

  ModelSEED/ModelSEED-UI#51 · Filter by author smoretti opened on Oct 6, 2016

• Does API return ModelSEED database version?

  ModelSEED/ModelSEED-UI#50 · Filter by author smoretti opened on Oct 6, 2016

• json download name of a model is "model" instead of model name

  ModelSEED/ModelSEED-UI#45 · Filter by author nconrad opened on Feb 1, 2016 · Version 2.0 Beta
  1

• clearify deltaG and deltaGErrs

  ModelSEED/ModelSEED-UI#41 · Filter by author nconrad opened on Oct 28, 2015 · Version 2.0 Beta
  1

• FBA simulation of all single gene KOs

  enhancement
  ModelSEED/ModelSEED-UI#39 · Filter by author jplfaria opened on Oct 26, 2015

• FBA with Genes KOs and make reaction KO actually work (currently it does nothing :().

  enhancement
  ModelSEED/ModelSEED-UI#38 · Filter by author jplfaria opened on Oct 26, 2015 · Version 2.0 Beta
  4

• Find "minimal media" output tab

  enhancement
  ModelSEED/ModelSEED-UI#37 · Filter by author jplfaria opened on Oct 26, 2015

• improve UX by making model rxn/cpd counts links

  ModelSEED/ModelSEED-UI#35 · Filter by author nconrad opened on Oct 26, 2015 · Version 2.0 Beta
  1

• Group heatmap by subsystems

  ModelSEED/ModelSEED-UI#31 · Filter by author nconrad opened on Oct 6, 2015 · Version 2.0 Beta
  1

• FBA Run ID naming

  enhancement
  ModelSEED/ModelSEED-UI#28 · Filter by author jplfaria opened on Sep 10, 2015 · Version 2.0 Beta
  1

• support generic editable tables

  ModelSEED/ModelSEED-UI#25 · Filter by author nconrad opened on Aug 28, 2015 · Version 2.0
  1

• Add support for model templates

  ModelSEED/ModelSEED-UI#24 · Filter by author mmundy42 opened on Aug 20, 2015 · Version 2.0
  2

• Test and deal with expired tokens

  ModelSEED/ModelSEED-UI#22 · Filter by author nconrad opened on Jul 23, 2015 · Version 2.0 Beta
  2

• ES6 compiling

  ModelSEED/ModelSEED-UI#20 · Filter by author nconrad opened on Jul 22, 2015 · Version 2.0
  1