Issues

• how to install sctools

  HumanCellAtlas/sctools#80 · Filter by author zhq90 opened on Aug 26, 2020
  1

• Generalize Barcode Platform r1 and i7 Inputs

  HumanCellAtlas/sctools#59 · Filter by author benjamincarlin opened on Mar 11, 2019

• Setuptools-scm causes documentation build to fail

  HumanCellAtlas/sctools#52 · Filter by author ambrosejcarr opened on Oct 12, 2018
  

• Remove Improper use of Tempfile.TemporaryDirectory()

  HumanCellAtlas/sctools#45 · Filter by author ambrosejcarr opened on Jul 12, 2018

• Extract constants (CB, UB, GE, CR, etc.) to a global consts python file

  ENH
  HumanCellAtlas/sctools#44 · Filter by author mbabadi opened on Jul 5, 2018
  1

  

• Benchmark biopython gff, pysam fastx and fasta

  HumanCellAtlas/sctools#35 · Filter by author ambrosejcarr opened on Apr 14, 2018
  2

• HTS-spec allows marking of duplicate reads. Can we mark duplicate fragments?

  ENH
  HumanCellAtlas/sctools#30 · Filter by author ambrosejcarr opened on Mar 30, 2018

• SCTools windows compatibility

  HumanCellAtlas/sctools#29 · Filter by author ambrosejcarr opened on Mar 30, 2018

• Attach10xBarcodes and TagSplitBam should be combined

  ENH
  HumanCellAtlas/sctools#28 · Filter by author ambrosejcarr opened on Mar 30, 2018

• Fastq module is unnecessarily complicated

  ENH
  HumanCellAtlas/sctools#26 · Filter by author ambrosejcarr opened on Mar 29, 2018

• Add Functional Tests

  ENH
  HumanCellAtlas/sctools#25 · Filter by author ambrosejcarr opened on Mar 29, 2018

• SC Tools needs a CONTRIBUTING.md

  ENHQ4-2018
  HumanCellAtlas/sctools#24 · Filter by author ambrosejcarr opened on Mar 27, 2018

• Update input data for metrics

  ENH
  HumanCellAtlas/sctools#22 · Filter by author ambrosejcarr opened on Mar 24, 2018