Issues

• Documentation and release notes for count observation model

  enhancementready-for-agent
  EPPIcenter/moire#50 · Filter by author m-murphy opened on Jun 18, 2026

• Count-aware simulator and simulation smoke test

  enhancementready-for-agent
  EPPIcenter/moire#49 · Filter by author m-murphy opened on Jun 18, 2026

• Count Poisson observation model — full MCMC inference path

  enhancementready-for-agent
  EPPIcenter/moire#48 · Filter by author m-murphy opened on Jun 18, 2026

• Count data loading and genotyping initialization

  enhancementready-for-agent
  EPPIcenter/moire#47 · Filter by author m-murphy opened on Jun 18, 2026

• Observation model interface with binary parity

  enhancementready-for-agent
  EPPIcenter/moire#46 · Filter by author m-murphy opened on Jun 18, 2026

• PRD: Count-based observation model (alternative to binary error process)

  enhancementready-for-agent
  EPPIcenter/moire#45 · Filter by author m-murphy opened on Jun 18, 2026

• Memory issue with very long allele names

  EPPIcenter/moire#44 · Filter by author m-murphy opened on Mar 26, 2025

• Select samples for allele frequency estimation

  enhancement
  Feature

  EPPIcenter/moire#43 · Filter by author essut opened on Mar 6, 2025
  1

• take a closer look at adaptation algorithms

  EPPIcenter/moire#41 · Filter by author m-murphy opened on Nov 8, 2024

• Detect potential data issues

  enhancement
  EPPIcenter/moire#30 · Filter by author m-murphy opened on Sep 6, 2024

• add diagnostics for parallel tempering

  enhancement
  EPPIcenter/moire#29 · Filter by author m-murphy opened on Sep 6, 2024

• allow for ZINB distributed COI

  enhancement
  EPPIcenter/moire#22 · Filter by author m-murphy opened on Jun 30, 2024

• add support for multiple populations

  enhancement
  EPPIcenter/moire#21 · Filter by author m-murphy opened on Jun 30, 2024

• eliminate openmp dependency and use tbb

  enhancement
  EPPIcenter/moire#17 · Filter by author m-murphy opened on Jun 28, 2024

• Convenience functions

  EPPIcenter/moire#7 · Filter by author m-murphy opened on Oct 2, 2023