Issues

• [Bug] Promoter intervals exceed chromosome boundaries on chrM (hg38)

  Bioconductor/GenomicFeatures#73 · Filter by author XinzeWu opened on Aug 21, 2025

• Error in x$.self$finalize() : attempt to apply non-function

  Bioconductor/GenomicFeatures#72 · Filter by author ChangqingW opened on Jul 18, 2025

• mirbase.db is out of date and is likely to be deprecated

  Bioconductor/GenomicFeatures#71 · Filter by author vjcitn opened on Mar 6, 2025

• makeTxDbFromEnsembl no longer connects to the right Ensembl database for Homo sapiens

  Bioconductor/GenomicFeatures#69 · Filter by author divibisan opened on Sep 20, 2024

• How to import pseudogenes from GFF3 file as GRanges object?

  Bioconductor/GenomicFeatures#68 · Filter by author zhewa opened on Apr 10, 2024

• mapToTranscripts reports incorrect regions when supplied GRangesList containing some empty transcripts

  Bioconductor/GenomicFeatures#54 · Filter by author kriemo opened on Jan 12, 2023
  1

• coverageByTranscript weights ?

  enhancement
  Bioconductor/GenomicFeatures#19 · Filter by author Roleren opened on Jan 31, 2020
  8

• pmapFromTranscripts strange behaviour

  Bioconductor/GenomicFeatures#10 · Filter by author Roleren opened on Sep 19, 2018
  12

  

• Make cdsBy(txdb, by="tx") return the CDS phase

  Bioconductor/GenomicFeatures#9 · Filter by author hpages opened on Aug 14, 2018